Getting Started
Overview
Installation
API
3D Attributes Animations and Visualization Transitions Area Graphs Aspect Ratio, Space and width Axis Bar Graphs Bin Plots Bins Boxplot Graphs Circular Graphs Citations or References Clustering Colors Combination Plots Confidence Intervals Contours Correlation Graphs DOE Data Data Context Data Customizer Data Faceting Data Filters Data Point Attributes Data Ratio Reference Data Selection Data Sorting Data Table Data Table/Filter Data Time Series Data Transformation Data UI Widgets Debug Decorations Dendrograms Density Plots Dotplot Graphs Effect Error Bars Events Fish Graphs Fit Lines Foreground and Background Gantt Charts General General Attributes Genome Browser Genome Browser Features Genome Browser Features: General parameters used in genome browser features Genome Browser Sequences Genome Browser Sequences: General parameters used in genome browser sequeces Genome Browser Tracks Genome Browser Tracks: General parameters used in genome browser tracks Gradients Graph Metadata Grey Out HTML Widgets Heatmap Color Indicators Heatmap Graphs Hierarchy Histograms Ideograms Images Kaplan Meier Plots LLM Legends Line Graphs Lines Loess Lollipop Graphs Manhattan Plots Manhattan and ManhattanCNV Plots Maps Maps Albers Maps Leaflet Maps Orthographic Margins Meter Graphs Missing Data Motion Charts Network Algorithm Parameters Network Cola Algorithm Parameters Network Communities Network Graphs Network Node and Edge Attributes Oncoprint Graphs Overlays Parallel Coordinates Graphs Pie Charts Plot and Panel Area Plot and Panel Areas Plot area Print Quantile Regression Plots R R-Axis Random Regression Remote Procedures Ridgeline Plots Samples Sankey Diagrams Scatter Plot Matrix Scatter Plots Shadows Shapes Stream Plots Swimmer Graphs Tag Cloud Text Text Placement Time Series Titles and Subtitles Transparency Treemap Graphs Trees UpSet Plots Variables Venn Diagrams Violin Plots Visium Plots X-Axis Y-Axis Z-Axis Zooming, Panning and Resizing cxplot false

Plot area : General parameters for the plotting area in one dimensional plots

# binAlignment

Alignment for the data points when binned
Type: string
Default: center
Options: left, center, right
Used in: Area, AreaLine, Bar, Boxplot, Correlation, DotLine, Dotplot, Heatmap, Line, ParallelCoordinates, Pie, Sankey, Stacked, StackedLine, StackedPercent, StackedPercentLine, TagCloud, Tree, Treemap

# binned

Flag to bin the data points in dotplots and boxplots
Type: boolean
Default: false
Used in: Area, AreaLine, Bar, Boxplot, Correlation, DotLine, Dotplot, Heatmap, Line, ParallelCoordinates, Pie, Sankey, Stacked, StackedLine, StackedPercent, StackedPercentLine, TagCloud, Tree, Treemap

# blockContrast

A flag to creates a shade between the samples so there are two backgrounds, one for the odd samples and one for the even samples
Type: boolean
Default: false
Used in: Area, AreaLine, Bar, Boxplot, Correlation, DotLine, Dotplot, Heatmap, Line, ParallelCoordinates, Pie, Sankey, Stacked, StackedLine, StackedPercent, StackedPercentLine, TagCloud, Tree, Treemap

# dotplotOutlineThreshold

Maximum number of data points before skipping plotting their outline but only the fill color
Type: integer
Default: 5000
Used in: Area, AreaLine, Bar, Boxplot, Correlation, DotLine, Dotplot, Heatmap, Line, ParallelCoordinates, Pie, Sankey, Stacked, StackedLine, StackedPercent, StackedPercentLine, TagCloud, Tree, Treemap

# guidesColor

Color for the the variables and / or samples in one dimensional graphs and multidimensional heatmaps just for aesthetics
Type: color
Default: rgb(204,204,204)
Used in: Area, AreaLine, Bar, Boxplot, Correlation, DotLine, Dotplot, Heatmap, Line, ParallelCoordinates, Pie, Sankey, Stacked, StackedLine, StackedPercent, StackedPercentLine, TagCloud, Tree, Treemap

# guidesLength

Length for the the variables and / or samples in one dimensional graphs and multidimensional heatmaps just for aesthetics
Type: float
Default: 5
Used in: Area, AreaLine, Bar, Boxplot, Correlation, DotLine, Dotplot, Heatmap, Line, ParallelCoordinates, Pie, Sankey, Stacked, StackedLine, StackedPercent, StackedPercentLine, TagCloud, Tree, Treemap

# guidesLineType

Type of line for the the variables and / or samples in one dimensional graphs and multidimensional heatmaps just for aesthetics
Type: string
Default: solid
Options: rect, solid, spline, dotted, dashed, dotdash, longdash, twodash
Used in: Area, AreaLine, Bar, Boxplot, Correlation, DotLine, Dotplot, Heatmap, Line, ParallelCoordinates, Pie, Sankey, Stacked, StackedLine, StackedPercent, StackedPercentLine, TagCloud, Tree, Treemap

# guidesShow

Flag to show/hide the the variables and / or samples in one dimensional graphs and multidimensional heatmaps just for aesthetics
Type: boolean
Default: false
Used in: Area, AreaLine, Bar, Boxplot, Correlation, DotLine, Dotplot, Heatmap, Line, ParallelCoordinates, Pie, Sankey, Stacked, StackedLine, StackedPercent, StackedPercentLine, TagCloud, Tree, Treemap

# guidesTransparency

Transparency for the color of the the variables and / or samples in one dimensional graphs and multidimensional heatmaps just for aesthetics
Type: float
Default: 1
Used in: Area, AreaLine, Bar, Boxplot, Correlation, DotLine, Dotplot, Heatmap, Line, ParallelCoordinates, Pie, Sankey, Stacked, StackedLine, StackedPercent, StackedPercentLine, TagCloud, Tree, Treemap

# guidesWidth

Size for the the variables and / or samples in one dimensional graphs and multidimensional heatmaps just for aesthetics
Type: float
Default: 1
Used in: Area, AreaLine, Bar, Boxplot, Correlation, DotLine, Dotplot, Heatmap, Line, ParallelCoordinates, Pie, Sankey, Stacked, StackedLine, StackedPercent, StackedPercentLine, TagCloud, Tree, Treemap

# is3DPlot

Flag to create or not a 3D plot
Type: boolean
Default: false
Used in: Area, AreaLine, Bar, Boxplot, Correlation, DotLine, Dotplot, Heatmap, Line, ParallelCoordinates, Pie, Sankey, Stacked, StackedLine, StackedPercent, StackedPercentLine, TagCloud, Tree, Treemap

# jitter

Flag to jitter the data points in dotplots, boxplots and scatter2D plots
Type: boolean
Default: false
Used in: Area, AreaLine, Bar, Boxplot, Correlation, DotLine, Dotplot, Heatmap, Line, ParallelCoordinates, Pie, Sankey, Stacked, StackedLine, StackedPercent, StackedPercentLine, TagCloud, Tree, Treemap

# jitterFactor

Factor for jittering. The larger the more jitter
Type: float
Default: 0.8
Used in: Area, AreaLine, Bar, Boxplot, Correlation, DotLine, Dotplot, Heatmap, Line, ParallelCoordinates, Pie, Sankey, Stacked, StackedLine, StackedPercent, StackedPercentLine, TagCloud, Tree, Treemap

# linesOnGroups

Flag to create lines on groups when multiple grouping factors are used
Type: boolean
Default: true
Used in: Area, AreaLine, Bar, Boxplot, Correlation, DotLine, Dotplot, Heatmap, Line, ParallelCoordinates, Pie, Sankey, Stacked, StackedLine, StackedPercent, StackedPercentLine, TagCloud, Tree, Treemap

# objectBorderColor

Color for the border of all objects in one dimensional graphs. It turns into the non-transparent fill color if set to false
Type: color
Default: rgba(0,0,0,0)
Used in: Area, AreaLine, Bar, Boxplot, Correlation, DotLine, Dotplot, Heatmap, Line, ParallelCoordinates, Pie, Sankey, Stacked, StackedLine, StackedPercent, StackedPercentLine, TagCloud, Tree, Treemap

# objectColorTransparency

The transparency for the color fill of all objects in one dimensional graphs. A value between 0 and 1
Type: float
Default: 1
Used in: Area, AreaLine, Bar, Boxplot, Correlation, DotLine, Dotplot, Heatmap, Line, ParallelCoordinates, Pie, Sankey, Stacked, StackedLine, StackedPercent, StackedPercentLine, TagCloud, Tree, Treemap

# plotByVariable

Flag to indicate whether to group the data variable rather than by sample
Type: boolean
Default: false
Used in: Area, AreaLine, Bar, Boxplot, Correlation, DotLine, Dotplot, Heatmap, Line, ParallelCoordinates, Pie, Sankey, Stacked, StackedLine, StackedPercent, StackedPercentLine, TagCloud, Tree, Treemap

# showDataValues

Flag to show/hide the data values in the one bar graphs
Type: boolean
Default: false
Used in: Area, AreaLine, Bar, Boxplot, Correlation, DotLine, Dotplot, Heatmap, Line, ParallelCoordinates, Pie, Sankey, Stacked, StackedLine, StackedPercent, StackedPercentLine, TagCloud, Tree, Treemap

# sina

Flag to jitter the data points in dotplots, boxplots and scatter2D plots with sina style
Type: boolean
Default: false
Used in: Area, AreaLine, Bar, Boxplot, Correlation, DotLine, Dotplot, Heatmap, Line, ParallelCoordinates, Pie, Sankey, Stacked, StackedLine, StackedPercent, StackedPercentLine, TagCloud, Tree, Treemap

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