CanvasXpress References

A curated collection of research papers, blog posts, and tutorials that feature CanvasXpress.

Featured Publications

  • Assessment of spatial transcriptomics for oncology discovery. Anna Lyubetskaya, Brian Rabe, Andrew Fisher, Anne Lewin, Isaac Neuhaus, Constance Brett, Todd Brett, Ethel Pereira, Ryan Golhar, Sami Kebede, Alba Font-Tello, Kathy Mosure, Nicholas Van Wittenberghe, Konstantinos J. Mavrakis, Kenzie MacIsaac, Benjamin J. Chen, Eugene Drokhlyansky. Cell Reports Methods. Vol 2, Issue 11, November 21, 2022. https://doi.org/10.1016/j.crmeth.2022.100340

  • Single Cell Viewer (SCV): An interactive visualization data portal for single cell RNA sequence data. Shuoguo Wang, Constance Brett, Mohan Bolisetty, Ryan Golhar, Isaac Neuhaus, Kandasamy Ravi. https://www.biorxiv.org/content/10.1101/664789v2

  • canvasDesigner: a versatile interactive high-resolution scientific multi-panel visualization toolkit. Baohong, Zhang; Shanrong, Zhao; Isaac, Neuhaus. Bioinformatics, bty377. https://Doi.Org/10.1093/Bioinformatics/Bty377

Blog Posts & Tutorials

How-To Documents

  • A primer using CanvasXpress with Python. HTML - Archive

  • A primer using CanvasXpress with ggplot in R. HTML - Archive

  • A primer using CanvasXpress with Reveal JS in Quarto. HTML - Archive

ggplot Demos