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Dendrograms API

# colorSmpDendrogramBy

colorSmpDendrogramBy option
Name of a sample annotation to color the variable dendrogram.
Default: false
Options: false
Used in: Area, AreaLine, Bar, Boxplot, Circular, DotLine, Dotplot, Heatmap, Line, ParallelCoordinates, Pie, Sankey, Stacked, StackedLine, StackedPercent, StackedPercentLine, TagCloud, Tree, Treemap

# colorVarDendrogramBy

colorVarDendrogramBy option
Name of a variable annotation to color the variable dendrogram.
Default: false
Options: false
Used in: Area, AreaLine, Bar, Boxplot, Circular, DotLine, Dotplot, Heatmap, Line, ParallelCoordinates, Pie, Sankey, Stacked, StackedLine, StackedPercent, StackedPercentLine, TagCloud, Tree, Treemap

# dendrogramColor

dendrogramColor color
The color for the dendrograms
Default: rgb(0,0,0)
Used in: Area, AreaLine, Bar, Boxplot, Circular, DotLine, Dotplot, Heatmap, Line, ParallelCoordinates, Pie, Sankey, Stacked, StackedLine, StackedPercent, StackedPercentLine, TagCloud, Tree, Treemap

# dendrogramHeight

dendrogramHeight integer
Size in pixels for the dendrogram.
Default: 80
Used in: Area, AreaLine, Bar, Boxplot, Circular, DotLine, Dotplot, Heatmap, Line, ParallelCoordinates, Pie, Sankey, Stacked, StackedLine, StackedPercent, StackedPercentLine, TagCloud, Tree, Treemap

# showSmpDendrogram

showSmpDendrogram boolean
Flag to show or not the sample dendrogram
Default: true
Used in: Area, AreaLine, Bar, Boxplot, Circular, DotLine, Dotplot, Heatmap, Line, ParallelCoordinates, Pie, Sankey, Stacked, StackedLine, StackedPercent, StackedPercentLine, TagCloud, Tree, Treemap

# showVarDendrogram

showVarDendrogram boolean
Flag to show or not the variable dendrogram
Default: true
Used in: Area, AreaLine, Bar, Boxplot, Circular, DotLine, Dotplot, Heatmap, Line, ParallelCoordinates, Pie, Sankey, Stacked, StackedLine, StackedPercent, StackedPercentLine, TagCloud, Tree, Treemap

# smpDendrogramNewick

smpDendrogramNewick string
Dendrogram in Newick format for the samples
Default: false
Used in: Area, AreaLine, Bar, Boxplot, Circular, DotLine, Dotplot, Heatmap, Line, ParallelCoordinates, Pie, Sankey, Stacked, StackedLine, StackedPercent, StackedPercentLine, TagCloud, Tree, Treemap

# smpDendrogramPosition

smpDendrogramPosition option
Position for the sample dendrogram in the plot. It could be top, bottom, right or left depending on the orientation of the one dimensional graph or inside or outside in circular graphs.
Default: left
Options: right, left
Used in: Area, AreaLine, Bar, Boxplot, Circular, DotLine, Dotplot, Heatmap, Line, ParallelCoordinates, Pie, Sankey, Stacked, StackedLine, StackedPercent, StackedPercentLine, TagCloud, Tree, Treemap

# varDendrogramNewick

varDendrogramNewick string
Dendrogram in Newick format for the variables
Default: false
Used in: Area, AreaLine, Bar, Boxplot, Circular, DotLine, Dotplot, Heatmap, Line, ParallelCoordinates, Pie, Sankey, Stacked, StackedLine, StackedPercent, StackedPercentLine, TagCloud, Tree, Treemap

# varDendrogramPosition

varDendrogramPosition option
Position for the variable dendrogram in the plot. It could be top, bottom, right or left depending on the orientation of the graph.
Default: top
Options: top, bottom
Used in: Area, AreaLine, Bar, Boxplot, Circular, DotLine, Dotplot, Heatmap, Line, ParallelCoordinates, Pie, Sankey, Stacked, StackedLine, StackedPercent, StackedPercentLine, TagCloud, Tree, Treemap

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