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Ideograms : General parameters for Idegrams

# ideogram

Ideogram. Additional ideograms can be loaded by appending to the CanvasXpress.chromosomes object. The format of the ideogram is based on the R data for USCS.hg19.chr
}
Type: string
Default: hg38
Options: hg19, hg38
Used in: Circular, Genome

# ideogramChromosomeNumber

Chromosome number
Type: string
Default: 1
Used in: Circular, Genome

# ideogramHeight

Default size in pixels of the ideogram height
Type: integer
Default: 20
Used in: Circular, Genome

# ideogramSegmentAlign

Align for the ideogram segment
Type: string
Default: center
Options: left, center, right
Used in: Circular, Genome

# ideogramSegmentBaseline

Baseline for the ideogram segment
Type: string
Default: middle
Options: top, middle, bottom
Used in: Circular, Genome

# ideogramSegmentColor

Color for the text in ideogram segment
Type: color
Default: rgb(0,0,0)
Used in: Circular, Genome

# ideogramSegmentFontSize

Font size for the text in ideogram segment. Be aware that auto scaling font must be turned off for this property to take effect. A more convenient way to modify the size is to use the ideogramSegmentScaleFontFactor
Type: integer
Default: 10
Used in: Circular, Genome

# ideogramSegmentFontStyle

Font style for the ideogram segment
Type: string
Default:
Options: , bold, italic, bold italic
Used in: Circular, Genome

# ideogramSegmentMargin

Margin used in ideogram segment
Type: float
Default: 8
Used in: Circular, Genome

# ideogramSegmentRotate

Rotation in degrees for the ideogram segment
Type: integer
Default:
Used in: Circular, Genome

# ideogramSegmentScaleFontFactor

Scaling factor used to increase or decrease the ideogram segment font size in the canvas
Type: float
Default: 1
Used in: Circular, Genome

# ideogramShowFullChromosome

Show the full chromosome
Type: boolean
Default: true
Used in: Circular, Genome

# showIdeogram

Flag to show/hide the Human Chromosome Ideogram. Force circular plots to be two dimensional
Type: boolean
Default: false
Used in: Circular, Genome

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