Samples

Properties associated with samples :


filterSmpBy filter
Filter samples by their annotation included in the 'data.x' object used in one dimensional plots
Default: []
Used in: all visualizations
filterSmpBy filter
Filter samples by their annotation included in the 'data.x' object used in one dimensional plots
Default: []
Used in: all visualizations
highlightSmp array
Name of samples in the 'data.y' object to highlight.
Default: []
Used in: all visualizations
highlightSmp array
Name of samples in the 'data.y' object to highlight.
Default: []
Used in: all visualizations
maxSmpStringLen integer
Maximum length in characters a sample label or description can have so anything above is truncated.
Default: 30
Used in: all visualizations
maxSmpStringLen integer
Maximum length in characters a sample label or description can have so anything above is truncated.
Default: 30
Used in: all visualizations
showSampleNames boolean
Flag to show the sample names in one dimensional plots.
Default: true
Used in: all visualizations
showSampleNames boolean
Flag to show the sample names in one dimensional plots.
Default: true
Used in: all visualizations
The color for the higlighted samples.
Default: rgb(255,0,0)
Used in: all visualizations
The color for the higlighted samples.
Default: rgb(255,0,0)
Used in: all visualizations
Sample label description is a valid sample classification included in the 'data.x' object used in heatmaps
Default: false
Used in: Heatmap
Sample label description is a valid sample classification included in the 'data.x' object used in heatmaps
Default: false
Used in: Heatmap
Font color for the sample labels in one dimensional plots
Default: rgb(0,0,0)
Used in: all visualizations
Font color for the sample labels in one dimensional plots
Default: rgb(0,0,0)
Used in: all visualizations
Size for the sample labels in one dimensional plots. Be aware that auto scaling font must be turned off for this property to take effect. A more convenient way to modify the size is to use the sample label scaling factor
Default: 12
Used in: all visualizations
Size for the sample labels in one dimensional plots. Be aware that auto scaling font must be turned off for this property to take effect. A more convenient way to modify the size is to use the sample label scaling factor
Default: 12
Used in: all visualizations
Font style for the sample label.
Default:
Options: , bold, italic, bold italic
Used in: all visualizations
Font style for the sample label.
Default:
Options: , bold, italic, bold italic
Used in: all visualizations
Interval for the sample labels in one dimensional and circular plots
Default: 1
Used in: all visualizations
Interval for the sample labels in one dimensional and circular plots
Default: 1
Used in: all visualizations
smpLabelRotate integer
Rotation for sample labels in degrees. It could be positive or negative.
Default:
Used in: all visualizations
smpLabelRotate integer
Rotation for sample labels in degrees. It could be positive or negative.
Default:
Used in: all visualizations
Scaling factor used to increase or decrease sample label font size in the canvas.
Default: 1
Used in: all visualizations
Scaling factor used to increase or decrease sample label font size in the canvas.
Default: 1
Used in: all visualizations
smpTitle string
Title for the sample axis in one dimensional plots
Default: false
Used in: all visualizations
smpTitle string
Title for the sample axis in one dimensional plots
Default: false
Used in: all visualizations
Font color for the sample title in one dimensional plots
Default: rgb(0,0,0)
Used in: all visualizations
Font color for the sample title in one dimensional plots
Default: rgb(0,0,0)
Used in: all visualizations
Size for the sample title in one dimensional plots
Default: 12
Used in: all visualizations
Size for the sample title in one dimensional plots
Default: 12
Used in: all visualizations
Font style for the samples.
Default:
Options: , bold, italic, bold italic
Used in: all visualizations
Font style for the samples.
Default:
Options: , bold, italic, bold italic
Used in: all visualizations
Scaling factor used to increse or decrease sample title font size in the canvas
Default: 1
Used in: all visualizations
Scaling factor used to increse or decrease sample title font size in the canvas
Default: 1
Used in: all visualizations