Dendrograms

General parameters in dendrograms


colorSmpDendrogramBy option
Name of a sample annotation to color the variable dendrogram.
Default: false
Options: false
colorSmpDendrogramBy option
Name of a sample annotation to color the variable dendrogram.
Default: false
Options: false
colorVarDendrogramBy option
Name of a variable annotation to color the variable dendrogram.
Default: false
Options: false
colorVarDendrogramBy option
Name of a variable annotation to color the variable dendrogram.
Default: false
Options: false
dendrogramHang boolean
Flag to show or not the nodes in the dendrogram as hanging or not similar to that one in R
See also: dendrogramHeight
Default: false
dendrogramHang boolean
Flag to show or not the nodes in the dendrogram as hanging or not similar to that one in R
See also: dendrogramHeight
Default: false
smpDendrogramNewick string
Dendrogram in Newick format for the samples
Default: true
smpDendrogramNewick string
Dendrogram in Newick format for the samples
Default: true
Position for the sample dendrogram in the plot. It could be top, bottom, right or left depending on the orientation of the graph.
Default: left
Options: right, left
Position for the sample dendrogram in the plot. It could be top, bottom, right or left depending on the orientation of the graph.
Default: left
Options: right, left
varDendrogramNewick string
Dendrogram in Newick format for the variables
Default: true
varDendrogramNewick string
Dendrogram in Newick format for the variables
Default: true
Position for the variable dendrogram in the plot. It could be top, bottom, right or left depending on the orientation of the graph.
Default: top
Options: top, bottom
Position for the variable dendrogram in the plot. It could be top, bottom, right or left depending on the orientation of the graph.
Default: top
Options: top, bottom